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cDNAライブラリー等

Studies in Mouse

• ICS: http://www-mci.u-strasbg.fr/

• MGI: http://www.informatics.jax.org/

• International Gene Trap Consortium: http://www.igtc.ca/

• German Genetrap Consortium (GGTC): http://tikus.gsf.de/

• The Gene Trap Consortium: http://www.genetrap.org/

• Allen Brain Atlas project: http://www.brainatlas.org/

• High Resolution Mouse Brain Atlas: http://www.hms.harvard.edu/research/brain/atlas.html

• The Whole Brain Atlas: http://www.med.harvard.edu/AANLIB/home.html/

Other Clone Provider

• GeneService: http://www.geneservice.co.uk/home/

• ATCC: http://www.atcc.org/Home.cfm

• HUNT: http://www.hri.co.jp/HUNT/

• The Jackson Laboratory: http://www.jax.org/

• NITE: http://www.nbrc.nite.go.jp/e/hflcdna-e.html#/

• imaGenes: http://www.imagenes-bio.de/

• RIKEN BRC: http://www.brc.riken.jp/inf/en/index.shtml/

DNA Databases and Related Links to Research Projects

• DDBJ: http://www.ddbj.nig.ac.jp/

• NCBI: http://www.ncbi.nlm.nih.gov/

• EMBL-EBI: http://www.ebi.ac.uk/services/

• RAT EST project: http://ratest.eng.uiowa.edu/

• I.M.A.G.E. Consortium: http://image.llnl.gov/

• Saccharomyces Genome Database: http://www.yeastgenome.org/

• WormBase: http://www.wormbase.org/

• UniGene: http://www.ncbi.nlm.nih.gov/entrez/query.fcgi?db=unigene/

• RefSeq: http://www.ncbi.nlm.nih.gov/RefSeq/

Full-length cDNA Databases

• Hunt: Human Novel Transcripts : http://www.hri.co.jp/HUNT/

• H-invitation: http://genome.wustl.edu/

• FANTOM 3 and CAGE: http://genome.ucsc.edu/cgi-bin/hgGateway

• MGC: http://biostatpub2.mdanderson.org/genecards/index.shtml

Promoter Databases

• Transfac: http://www.hri.co.jp/HUNT/

• TRRD: http://genome.wustl.edu/

• TraFaC: http://genome.ucsc.edu/cgi-bin/hgGateway

• Jaspar: http://biostatpub2.mdanderson.org/genecards/index.shtml

• Genomatix: http://www.genomatix.de/

• TFSEARCH: http://www.cbrc.jp/research/db/TFSEARCH.html

CAGE™/5'-SAGE

• 5'-SAGE: http://5sage.gi.k.u-tokyo.ac.jp/

• CAGE tags at DDBJ: ftp://ftp.ddbj.nig.ac.jp/database/mga/AA_resource_index.html

• CAGE basic viewer (mouse): http://fantom31p.gsc.riken.jp/cage/mm5/

• CAGE basic viewer (human): http://fantom31p.gsc.riken.jp/cage/hg17/

• CAGE analysis viewer (mouse): http://fantom31p.gsc.riken.jp/cage_analysis/mm5/

• CAGE analysis viewer (human): http://fantom31p.gsc.riken.jp/cage_analysis/hg17/

• Absolute READ database: http://genome.gsc.riken.jp/absolute

Other useful Databases

• RCSB Protein Database: http://www.rcsb.org/pdb/

• GenomeNet: http://www.genome.jp/

• KEGG: http://www.genome.jp/kegg/

• ExPASy Proteomics Server: http://kr.expasy.org/

• ENZYME nomenclature database: http://kr.expasy.org/enzyme/

• Gene Ontology: http://www.geneontology.org/

Other useful links

• Collection of links to databases: http://condor.bcm.tmc.edu/databases.html

FANTOM®クローン

• RIKEN, The Institute of Physical and Chemical Research: http://www.riken.jp

• RIKEN GSC: http://www.gsc.riken.go.jp/eng/group/genome/index.html

• RIKEN FANTOM Database: http://fantom.gsc.riken.jp/

• Public Databases:

http://www.ddbj.nig.ac.jp/
http://www.ncbi.nlm.nih.gov/
http://www.ebi.ac.uk/services/
http://www.informatics.jax.org/

DNAブック®

• DNAブックHP（理化学研究所）: http://genome.gsc.riken.jp/DNA-Book/

• マウスDNAブックデータベース: http://gerg03.gsc.riken.jp/DNABook_DB/

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